Documents
User Guide
Publications
Journals:
Nunu Ren, Heng Zhao, Shouping Zhu, Xiaochao Qu, Duofang Chen, Hongliang Liu, Zhenhua Hu, Jimin Liang, and Jie Tian. Voxel classification methodology for rapid Monte Carlo simulation of light propagation in complex media. Chinese Optics Lstters, Vol. 9, No. 4, 041701-4, 2011.
Xueli Chen, Xinbo Gao, Xiaochao Qu, Duofang Chen, Xiaopeng Ma, Jimin Liang, and Jie Tian. Generalized free-space diffuse photon transport model based on the influence analysis of a camera lens diaphragm. Applied Optics, Vol. 49, No. 29, 5654-5664, 2010.
Xueli Chen, Xinbo Gao, Duofang Chen, Xiaopeng Ma, Xiaohui Zhao, Man Shen, Xiangsi Li, Xiaochao Qu, Jimin Liang, Jorge Ripoll, and Jie Tian. 3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images. Optics Express, Vol. 18, No. 19, 19876-19893, 2010.Nunu Ren, Jimin Liang, Xiaochao Qu, Jianfeng Li, Bingjia Lu, and Jie Tian. GPU-based Monte Carlo simulation for light propagation in complex heterogeneous tissues. Optics Express, Vol. 18, No. 7, 6811-6823, 2010. [PDF]
Tao Wang, Shuping Gao, Ling Zhang,Yan Wu, Xiaowei He, Yanbin Hou,Heyu Huang, Jie Tian. Overlap Domain Decomposition Method for Bioluminescence Tomography (BLT). Communications in Numerical Methods in Engineering, Vol. 26, No. 5, 511-523, 2010.
Xueli Chen, Xinbo Gao, Xiaochao Qu, Duofang Chen, Bin Ma, Lin Wang, Kuan Peng, Jimin Liang, and Jie Tian. Qualitative Simulation of Photon Transport in Free Space Based on Monte Carlo Method and Its Parallel Implementation.International Journal of Biomedical Imaging, Vol. 2010, Article ID 650298, 9 pages, 2010.[PDF]
Kuan Peng, Xinbo Gao, Jimin Liang, Xiaochao Qu, Nunu Ren, Xueli Chen, Bin Ma, and Jie Tian. Study on Photon Transport Problem Based on the Platform of Molecular Optical Simulation Environment. International Journal of Biomedical Imaging, Vol. 2010, Article ID 913434, 9 pages. [PDF]
Yujie Lv, Xiaoqun Zhang, Ali Douraghy, David Stout, Jie Tian, Tony F. Chan and Arion F. Chatziioannou. Source Reconstruction for spectrally-resolved bioluminescence tomography with sparse a priori information. Optics Express, Vol. 17, No. 10, 8062-8080, 2009. [PDF]
Xueli Chen, Xinbo Gao, Xiaochao Qu, Jimin Liang, Lin Wang, Da'an Yang, Anikitos Garofalakis, Jorge Ripoll, and Jie Tian. A study of photon propagation in free-space based on hybrid radiosity-radiance theorem. Optics Express, Vol. 17, No. 18, 16266-16280, 2009. [PDF]
Jinchao Feng, Kebin Jia, Chenghu Qin, Guorui Yan, Shouping Zhu, Xing Zhang, Junting Liu and Jie Tian. Three-dimensional Bioluminescence Tomography based on Bayesian Approach. Optics Express, Vol. 17, No. 19, 16834–16848, 2009. [PDF]
Runqiang Han, Jimin Liang, Xiaochao Qu, Yanbin Hou, Nunu Ren, Jingjing Mao, and Jie Tian. A source reconstruction algorithm based on adaptive hp-FEM for bioluminescence tomography. Optics Express, Vol. 17, No. 17, pp.14481-14494, 2009. [PDF]
Yujie Lv, Ali Douraghy, Hidevaldo B. Machado, David Stout, Jie Tian, Harvey Herschman, and Arion F. Chatziioannou. Spectrally-resolved bioluminescence tomography with the third-order simplified spherical harmonics approximation. Physics in Medicine and Biology, Vol. 54, No. 21, 6477-93, 2009.
Jinchao Feng, Kebin Jia, Guorui Yan, Shouping Zhu, Chenghu Qin, Yujie Lv, and Jie Tian, An optimal permissible source region strategy for multispectral bioluminescence tomography, Optics Express, Vol. 16, No. 20, 15640-15654, 2008. [PDF]
Chenghu Qin, Jie Tian, Xin Yang, Kai Liu, Guorui Yan, Jinchao Feng, Yujie Lv, and Min Xu, Galerkin-based meshless methods for photon transport in the biological tissue, Optics Express, Vol. 16, No. 25, 20317–20333, 2008.[PDF]
Guorui Yan, Jie Tian, Shouping Zhu,Yakang Dai and Chenghu Qin, Fast cone-beam CT image reconstruction using GPU hardware, journal of X-Ray Science and Technology, Vol. 16, No. 4, 225–234, 2008.[PDF]
Jin Shi, Jie Tian, Min Xu, Reconstruction-Oriented Multigrid Finite Element Algorithm on Bioluminescence Tomography Incorporating Priori Information, Communications in Numerical Methods in Engineering, Vol. 25, No. 6, 683-692, 2009.[PDF]
Yanbin Hou, Jie Tian, Yan Wu, Jimin Liang, Xiaowei He. A new numerical method for BLT forward problem based on high-order finite elements. Communications in Numerical Methods in Engineering, Vol. 25, No. 6, 667-681, 2009.[PDF]
Jie Tian, Wenxiang Cong, Jing Bai, Ming Jiang, and Wei Liang. Recent Advances in Molecular Imaging. International Journal of Biomedical Imaging, Vol. 2007, Special issue.[PDF]
Jie Tian, Jing Bai, Xiu Ping Yan, Shanglian Bao, Yinghui Li, Wei Liang, Xin Yang. Multimodality Molecular Imaging, Vol. 27, No. 5, 2008.[PDF]
Yujie Lv, Jie Tian, Hui Li, Wenxiang Cong, Ge Wang, Wei Yang, Chenghu Qin, Min Xu, Spectrally resolved bioluminescence tomography with adaptive finite element: methodology and simulation, Physics in Medicine and Biology, Vol. 52, No. 15, 4497-4512, 2007.[PDF]
Yujie Lv, Jie Tian, Wenxiang Cong, and Ge Wang, Experimental Study on Bioluminescence Tomography with Multimodality Fusion, International Journal of Biomedical Imaging, Vol. 2007, Article ID 86741,4 pages, 2007. [PDF]
Yujie Lv, Jie Tian, Hui Li,Jie Luo, Wenxiang Cong, Ge Wang, Durairaj Kumar, Modeling the forward problem based on the adaptive FEMs framework in bioluminescence tomography, Proceedings of the SPIE, Vol. 6318, 2006.[PDF]
Hui Li, Jie Tian, Jie Luo, Yujie Lv, Wenxiang Cong and Ge Wang, Design and Implementation of an Optical Simulation Environment for Bioluminescent Tomography Studies, Progress in Natural Science, Vol.17, No.1, 87-94, 2007.[PDF]
Yujie Lv, Jie Tian, Wenxiang Cong, Ge Wang, Jie Luo, Wei Yang, and Hui Li, A multilevel adaptive finite element algorithm for bioluminescence tomography, Optics Express, Vol.14, 8211–8223, 2006.[PDF]
Ge Wang, Wenxiang Cong, Yi Li, Weimin Han, Durai Kumar, Xin Qian, Haiou Shen, Ming Jiang, Tie Zhou, Jiantao Cheng, Jie Tian, Yujie Lv, Hui Li, Jie Luo. Recent development in bioluminescence tomography. Current Medical Imaging Reviews, Vol.2, 453-457, 2006.[PDF]
Hui Li, Jie Tian, Fuping Zhu, Wenxiang Cong, Lihong V. Wang, Eric A. Hoffman, Ge Wang, A Mouse Optical Simulation Environment (MOSE) to Investigate Bioluminescent Phenomena in the Living Mouse with the Monte Carlo Method, Academic Radiology, Vol.11, No.9, 1029-1038, 2004.[PDF]
Conference proceedings:
Chenghu Qin, Jie Tian, Xin Yang, Kai Liu, Jinchao Feng, Min Xu, Meshless local Petrov-Galerkin method for bioluminescent photon propagation in the biological tissue, Proceedings of SPIE Symposium on Medical Imaging 2009, Lake Buena Vista, Florida, USA, February 7-12, 2009, Oral Report.
Kai Liu, Jie Tian, Chenghu Qin, Dan Liu, Xin Yang and Min Xu, A Hybrid P1-DP0 Diffusion Theory for Optical Imaging, Proceedings of SPIE Symposium on Medical Imaging 2009, Lake Buena Vista, Florida, USA, February 7-12, 2009.
Jinchao Feng, Kebin Jia, Jie Tian, Guorui Yan, Shouping Zhu, Three-dimensional localization of in vivo bioluminescent source based on multispectral imaging, Proceedings of SPIE Symposium on Medical Imaging 2009, Lake Buena Vista, Florida, USA, February 7-12, 2009.
Li Sun, Pu Wang, Jie Tian, Dan Liu, Ruifang Wang, A Posteriori Correction for Source Decay in 3D Bioluminescent Source Localization Using Multiview Measured Data, Proceedings of SPIE Symposium on Medical Imaging 2009, Lake Buena Vista, Florida, USA, February 7-12, 2009.
Jianghong Zhong, Ruiping Wang, Jie Tian. Robust image modeling technique with a bioluminescence image segmentation application, Proceedings of SPIE Symposium on Medical Imaging 2009, Lake Buena Vista, Florida, USA, February 7-12, 2009.
Xiaowei He, Jie Tian, Yan Wu, Yanbin Hou, Nunu Ren, Kuan Peng. Study of four Regularization methods for the inverse problem in Bioluminescence Tomography. Proccedings of SPIE Symposium on Medical Imaging 2009, Lake Buena Vista, Florida, USA, February 7-12, 2009.
Chenghu Qin, Jie Tian, Yujie Lv, Wei Yang, Three-dimensional bioluminescent source reconstruction method based on nodes of adaptive FEM, Proceedings of SPIE Symposium on Medical Imaging, San Diego, California USA, 16-21 February, 2008 Oral Report.[PDF]
Kai Liu, Jie Tian, Pu Wang, Dan Liu, Yujie Lv, Min Xu and Chenghu Qin, An Adaptive Multigrid Method for Modeling Photon Transport through Biological Tissues in Bioluminescence Tomography, Proceedings of IEEE EMBS 2008,Vancouver, British Columbia, Canada, August 20-24, 2008.[PDF]
Chenghu Qin, Jie Tian, Kai Liu, Yakang Dai, The forward problem algorithm based on modified element free Galerkin method for bioluminescence tomography, Proceedings of IEEE EMBS 2008, Vancouver, British Columbia, Canada, August 20-24, 2008, oral report.[PDF]
Yujie Lv, Jie Tian, Wenxiang Cong, Ge Wang, and Durairaj Kumar, MicroCT-guided Bioluminescence Tomography Based on the Adaptive Finite Element Tomographic Algorithm, Proceedings of EMBS 2006, New York,USA, August 30-September 3, 2006, Oral Report.
Yujie Lv, Jie Tian, Wenxiang Cong, Ge Wang, Wei Yang, and Chenghu Qin, A Multiscale Reconstruction Method for Bioluminescence Tomography Using Multiple A Priori Information, the 4rd IEEE International Symposium on Biomedical Imaging.[PDF]
Yujie Lv, Jie Tian, Hui Li, Jie Luo, Wenxiang Cong，Ge Wang, and Durairaj Kumar，Modeling the forward problem based on the adaptive FEMs framework in bioluminescence tomography, Proceedings of SPIE Optics & Photonics 2006, San Diego, California USA, Sep. 7, 2006, Vol. 6318, pp.63180I, Oral Report.